Bioinformatics for Microbiome

Institution University
Course Doctoral Thesis in B...
Year 1st Year
Semester Unknown
Posted By Allan Gath
File Type pdf
Pages 55 Pages
File Size 3.41 MB
Views 3690
Downloads 0
Price: Buy Now whatsapp Buy via whatsapp
  • whatsapp
  • facebook
  • twitter

Description

Doctoral Thesis: Bioinformatics for Microbiome Analysis **Author:** Luis Fernando Delgado **Institution:** KTH Royal Institute of Technology, Stockholm, Sweden **Year:** 2024 Thesis Overview This doctoral thesis advances **bioinformatics methodologies** for the analysis of marine microbiomes, with a focus on microbial ecology, genomics, and population genetics, primarily in the Baltic Sea environment. It comprises four research papers addressing metagenomics, pangenomics, comparative genomics, and population genomics, supported by the development of novel computational pipelines and interactive tools. The work leverages cutting-edge next-generation sequencing (NGS) and bioinformatics to decode microbial diversity, functional potential, and pathogenicity factors, particularly for the bacterium Vibrio vulnificus. The research evaluates metagenomic assembly approaches for creating biome-specific gene catalogues, highlighting the effectiveness of the mix-assembly method in extracting information from metagenomic samples. A web-based tool, BAGS-Shiny, was developed to explore the Baltic Sea microbial gene set, facilitating reproducibility and broad applicability of the mix-assembly approach. The study also includes whole-genome sequencing of environmental Vibrio vulnificus strains, revealing insights into pathogenicity and adaptation mechanisms in response to changing environmental conditions.
Below is the document preview.

No preview available
Machine Learning Projects Trending!
Comprehensive compilation of machine learning projects using python, with step by step guides.
135 Pages 3290 Views 0 Downloads 2 MB
Linear Model Regression Trending!
Comprehensive resource for linear model regression concepts.
29 Pages 3215 Views 0 Downloads 11.43 MB
Introduction To Artificial/ Machine Intelligence Trending!
Comprehensive introduction to machine intelligence ,commonly, artificial intelligence.
71 Pages 3306 Views 0 Downloads 2.5 MB
Python Libraries Trending!
Expand your knowledge in python with this compilation to a far reaching depth.
74 Pages 3172 Views 0 Downloads 4.13 MB
Pyhton CheatSheet Trending!
Detailed exam cheat sheet for python
26 Pages 3740 Views 0 Downloads 3.02 MB
Python, AI, data science machine learning Cheat Sheet Trending!
Comprehensive Python, AI, data science machine learning exams Cheat Sheet
15 Pages 3725 Views 0 Downloads 2.13 MB
PySpark Python Cheat sheet Trending!
Comprehensive PySpark Python exams Cheat sheet
21 Pages 3298 Views 0 Downloads 5.14 MB
ADVANCED FINANCIAL REPORTING THEORY REVISION Trending!
Factors to be considered in choosing the presentation currency 1. Whether the activities of the foreign operation are carried out as an extension of the reporting entity or are being carried out with significant degree of autonomy. 2. Whether the transactions with the reporting entity are high or low proportion of the foreign operations activities. 3. Whether cash flows from the activities of the foreign operation directly affects the cash flows of the reporting entity or not. 4. Whether foreign operations is able to borrow and service its own debts independently. June 2010 Question Two (a) Differences between income statement view and balance sheet view of deferred taxes: When the income statement view of deferred taxes is taken, there is a focus on the differences between the accounting profit and and taxable profit ie timing differences. This was the view of deferred taxes taken internationally and in UK and USA until the 1990s.The balance sheet view focuses on the difference between the carrying amount of assets and liabilities and their tax bases. It is the method recommended by IAS 12. (b) (i) Nil provision This is where the financial statements are prepared without reflecting all the effects of tax iethere is not provision for deferred taxes. (ii) Partial provision Under this approach deferred tax is provided but not on all temporary differences. The management uses a subjective approach in deciding which temporary differences may crystallize.ie you provide for future tax consequences to the extent that you have reasonable evidence that it will reverse within a reasonable period of time usually 3 years.
17 Pages 4104 Views 0 Downloads 785.01 KB
ADVANCED FINANCIAL MANAGEMENT Revision kit Trending!
Download full revision kit for Advanced Financial Management Paper. This kit has a number questions that will boost your understanding and knowledge in matters AFM.
230 Pages 4053 Views 0 Downloads 7.39 MB
2002-2019-Advanced Financial Management Past Papers Trending!
This documents contains past papers from the year 2002 to 2019 for Advanced Financial Management . Get equipped with possible question in the next paper of Advanced Financial Management .
288 Pages 4253 Views 0 Downloads 3.43 MB